Recent publications
Article
Das, S, Pandey, AK, Morris, DE, Anderson, R, Lim, V, Wie, CC, Yap, IKS, Alattraqchi, AG, Simin, H, Abdullah, R, Yeo, CC, Clarke, SC & Cleary, DW 2024, 'Respiratory carriage of hypervirulent Klebsiella pneumoniae by indigenous populations of Malaysia', BMC Genomics, vol. 25, no. 1, 381. https://doi.org/10.1186/s12864-024-10276-4
Cleary, DW, Lo, SW, Kumar, N, Bentley, SD, Faust, SN & Clarke, SC 2023, 'Comparative genomic epidemiology of serotype 3 IPD and carriage isolates from Southampton, UK between 2005 and 2017', Microbial Genomics, vol. 9, no. 3, 000945. https://doi.org/10.1099/mgen.0.000945
Woodall, CA, Hammond, A, Cleary, D, Preston, A, Muir, P, Pascoe, B, Sheppard, SK & Hay, AD 2023, 'Oral and gut microbial biomarkers of susceptibility to respiratory tract infection in adults: A feasibility study', Heliyon, vol. 9, no. 8, e18610. https://doi.org/10.1016/j.heliyon.2023.e18610
Christodoulides, M, de Oliveira, D, Cleary, DW, Humbert, MV, Machado-de-Ávila, RA & La Ragione, RM 2022, 'An in silico reverse vaccinology study of Brachyspira pilosicoli, the causative organism of intestinal spirochaetosis, to identify putative vaccine candidates', Process Biochemistry, vol. 122, pp. 128-148. https://doi.org/10.1016/j.procbio.2022.08.014
O'Neill, CE, Skilton, RJ, Forster, J, Cleary, DW, Pearson, SA, Lampe, DJ, Thomson, NR & Clarke, IN 2022, 'An inducible transposon mutagenesis approach for the intracellular human pathogen Chlamydia trachomatis', Wellcome Open Research, vol. 6, 312. https://doi.org/10.12688/wellcomeopenres.16068.1
Cleary, DW, Jones, J, Gladstone, RA, Osman, KL, Devine, VT, Jefferies, JM, Bentley, SD, Faust, S & Clarke, S 2022, 'Changes in serotype prevalence of Streptococcus pneumoniae in Southampton, UK between 2006 and 2018', Scientific Reports, vol. 12, no. 1, 13332. https://doi.org/10.1038/s41598-022-17600-6
Rani, FM, Lean, SS, Rahman, NIA, Ismail, S, Alattraqchi, AG, Amonov, M, Cleary, DW, Clarke, S & Yeo, CC 2022, 'Comparative genomic analysis of clinical Acinetobacter nosocomialis isolates from Terengganu, Malaysia led to the discovery of a novel tetracycline-resistant plasmid', Journal of Global Antimicrobial Resistance, vol. 31, pp. 104-109. https://doi.org/10.1016/j.jgar.2022.08.019
Theodosiou, AA, Laver, JR, Dale, AP, Cleary, DW, Jones, CE & Read, RC 2022, 'Controlled human infection with Neisseria lactamica in late pregnancy to measure horizontal transmission and microbiome changes in mother-neonate pairs: a single-arm interventional pilot study protocol', BMJ open, vol. 12, no. 5, e056081. https://doi.org/10.1136/bmjopen-2021-056081
Mohd Rani, F, Rahman, NIA, Ismail, S, Cleary, D, Clarke, S & Yeo, CC 2022, 'Draft genome sequences of two Acinetobacter soli clinical isolates from a tertiary hospital in Terengganu, Malaysia', Microbiology resource announcements, vol. 11, no. 4, e0008222. https://doi.org/10.1128/mra.00082-22
Abstract
Rani, FM, A Rahman, NI, Ismail, S, Othman, N, Abdullah, FH, Cleary, D, Clarke, S & Yeo, CC 2023, 'Whole genome sequence analysis of two Acinetobacter oleivorans clinical isolates from Terengganu, Malaysia, revealed the carriage of several virulence factors', International Journal of Infectious Diseases, vol. 130, no. Supplement 2, pp. S143-S143. https://doi.org/10.1016/j.ijid.2023.04.351
Din, NS, Rani, FM, Ismail, S, A Rahman, NI, Othman, N, Abdullah, FH, Cleary, D, Clarke, S & Yeo, CC 2023, 'Whole genome sequencing of Acinetobacter baumannii clinical isolates from Terengganu, Malaysia (2017 – 2018) revealed the predominance of the multidrugresistance ST2, GC2 lineage', International Journal of Infectious Diseases, vol. 134, no. Supplement 1, pp. S11-S11. https://doi.org/10.1016/j.ijid.2023.05.044
Poster
Cleary, D, Jones, J, Campling, J, Lahuerta, M, Hayford, K, Southern, J, Gessner, BD, Bentley, SD, Faust, SN & Clarke, SC 2023, 'Changes in paediatric pneumococcal carriage in Southampton UK during the SARS-CoV2 pandemic', 16th European Meeting on the Molecular Biology of the Pneumococcus, Rithymna, Greece, 23/05/23 - 26/05/23.
Golm, D, Law, A & Cleary, D 2023, 'The interplay between prenatal health behaviours, neurodevelopmental diagnoses and alterations in the gut microbiome: an umbrella review', 56th Annual Meeting of the International Society for Developmental Psychobiology, Utrecht, Netherlands, 26/07/23 - 28/07/23. <https://www.xcdsystem.com/isdp/program/fl8EZVu/index.cfm?pgid=2892&sid=27201&abid=101482>
Houghton, R, Cleary, D & Clark, T 2023, 'Undiagnosed acute undifferentiated fever is associated with longer hospital admissions in immunocompetent adults', European Congress of Clinical Microbiology and Infectious Diseases, Copenhagen, Denmark, 15/04/23 - 18/04/23.
Review article
Lister, AJJ, Dombay, E, Cleary, DW, Sulaiman, LH & Clarke, SC 2023, 'A brief history of and future prospects for pneumococcal vaccination in Malaysia', Pneumonia, vol. 15, no. 1, 12. https://doi.org/10.1186/s41479-023-00114-8
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