Dr Krishna Margadhamane Gokhale PhD, MSc

Dr Krishna Margadhamane Gokhale

Department of Applied Health Sciences
Associate Professor of Digital Engineering and Health Informatics

Contact details

Address
Y16 Building
University of Birmingham
Edgbaston
Birmingham
B15 2TT
UK

Dr Krishna Gokhale is Associate Professor of Digital Engineering and Health Informatics in the Department of Applied Health Sciences. He is a computer scientist who builds technology that turns routinely collected NHS health records into data that researchers can use. 

Krishna is the architect of Dexter (now a spinout company from the University) a platform that automates the design and data extraction of epidemiological studies on large UK electronic health record databases, including CPRD, HES, BadgerNet, IMRD, THIN-UK, THIN-EU, and data in OMOP format. Studies that used to take months of specialist programming can be set up in minutes. Dexter has supported more than 165 peer-reviewed publications and has underpinned research grants worth more than £30 million to the University.

He leads the Research Software Engineering team in the Health Informatics and Multimorbidity group and works with NHS trusts and the Secure Data Environments across UK to bring hospital and maternity data into the same research-ready framework. His current work covers data-driven clinical trials, medication safety, maternity services data, and exploring the role of AI to help clinicians turn research questions into study protocols.

Qualifications

  • PhD in Computer Science, University of Birmingham, 2024
  • MSc in Advanced Computer Science, University of Birmingham, 2016
  • BE in Computer Science and Engineering, Visvesvaraya Technological University, India, 2013

Biography

Krishna graduated in Computer Science and Engineering from Visvesvaraya Technological University, India, in 2013 and worked as a software engineer at Capgemini India, developing and integrating enterprise systems for energy and finance clients. He moved to the UK for an MSc in Advanced Computer Science at the University of Birmingham, where he also taught Java programming and algorithms to undergraduate students. 

In late 2016 he joined what is now the Department of Applied Health Sciences to support Health Informatics and Epidemiology research and built a prototype tool for automating data extraction from primary care records. That prototype became DExtER (Data Extraction for Epidemiological Research). He developed and validated it as a part of his PhD (part-time) in the School of Computer Science supervised by Professor Peter Tiňo and Professor Krish Nirantharakumar. His doctoral work set out methods for automating epidemiological study designs, and used repeated measurements and machine learning to improve cardiovascular risk prediction in people with type 2 diabetes. The DExtER methods paper, published in the European Journal of Epidemiology in 2021, won the University's Michael O'Rourke Prize for the best publication from a PhD. 

In 2022 the team's data work was recognised by Health Data Research UK with its Team of the Year award and a Hidden Talent award. Krishna became Senior Research Fellow in 2023, taking responsibility for the department's research software engineering function and its data licences with CPRD, IQVIA and Cegedim, and was awarded his PhD in 2024. 

Alongside his academic work, Krishna led the commercialisation of Dexter through University of Birmingham Enterprise and Innovate UK's ICURe programme, leading to the spin-out company Dexter AI Ltd in 2023 and serves as Director and Chief Technology Officer of the company. He was appointed Associate Professor of Digital Engineering and Health Informatics in 2026.

Teaching

Teaching Programmes

Health Informatics technical induction and Dexter training programme for new researchers, PhD and MSc students (lead, since 2017)

Real-World Data and Evidence training short course for medical students and junior doctors (co-designer and tutor, 2025, 2026)

Methods and data support for MSc dissertations and doctoral projects using UK primary care databases

Invited talks

Training on automated real-world evidence research at Maastricht University (2018), MORU and the National Health Foundation, Thailand (2022), New York State Department of Health (2023), the University of Western Australia (2023), The Ministry of Health of Peru (2025) and in Sri Lanka through the NIHR DigiPaths programme (2025)

Postgraduate supervision

Krishna supervises doctoral research in health data engineering, clinical decision support and methods for electronic health records. Current PhD students:

  • Nissy Abraham (lead supervisor) – a data model for research on UK maternity services data
  • Kasthuriraajan Ratnasingam (lead supervisor) – evaluation and implementation of AI and traditional clinical decision support systems in electronic health records
  • Sai Suhas Varik (co-supervisor) – an automated pipeline for external validation and recalibration of risk prediction models in secondary care 

He has also given methods and data support to more than 60 postgraduate researchers and MSc students working with CPRD-HES, THIN and IMRD data. 

He welcomes enquiries from prospective PhD students interested in health data engineering, real-world evidence methods, and AI for electronic health records. 

For a full list of available Doctoral Research opportunities, please visit our Doctoral Research programme listings.

Research

Krishna's research sits between software engineering and epidemiology. He builds methods and platforms that make observational research on electronic health records faster and more reproducible, and that let clinicians and epidemiologists work with large datasets without specialist programming. 

Automating epidemiological study designs

Dexter encodes common study designs – cohort, matched cohort, case-control, nested case-control and cross-sectional – as executable software, so that the extraction step handles common sources of bias consistently. It runs on a common data model that harmonises UK primary care databases (CPRD Aurum and GOLD with HES linkage, IQVIA Medical Research Data, and THIN UK and Europe). The platform has more than 100 active users in the University and has supported research on diabetes and cardiometabolic disease, mental health, women's and maternal health, eye disease, long COVID, pharmacoepidemiology, and the evaluation of national guidance.

Hospital and maternity data

He is extending the Dexter approach beyond primary care to hospital and maternity data, where the unit of analysis is not always a single patient. With the West Midlands Secure Data Environment and NHS trusts in the region, his team is building a research-ready maternity data model that brings together records from systems such as BadgerNet and Epic, and is mapping acute care data from University Hospitals Birmingham. Earlier work with Shrewsbury and Telford Hospital NHS Trust, to help with clinical audit of maternity records so that every case can be reviewed rather than a sample.

Data-driven trials and medication safety

Dexter has been used to emulate trials in historical populations to estimate recruitment and sample size, work that supported the funding of the NIHR DaRe2THINK trial, and to identify eligible participants for the NIHR-funded RADIANT trial of cardiometabolic testing in women with previous gestational diabetes, on which he is co-investigator. His current work includes reusable pipelines for detecting medication safety signals in primary and hospital care data. 

AI and foundation models

Krishna was co-investigator on the NIHR OPTIMAL study and the UKRI AI Accelerate project, which produced SurvivEHR, a time-to-event foundation model for multiple long-term conditions trained on primary care records. He is now working on language-model tools that help clinicians turn a research question into a well-defined study protocol that runs on the platform, with researchers keeping control of design decisions. 

Global health

In the NIHR DigiPaths programme he leads the technical work packages on digitally integrated care pathways for people with multiple long-term conditions in Sri Lanka, including interoperability with FHIR and the OMOP common data model.

Selected funding

  • NIHR Global Health Research: DigiPaths – digitally integrated care pathways for multiple long-term conditions in Sri Lanka (co-investigator, £3.9M, 2024–2029)
  • NIHR Birmingham Biomedical Research Centre: Data, Diagnostics and Decision Tools theme (co-investigator, 2022–2027)
  • Asthma + Lung UK: sickness absence and its cost associated with lung disease in the UK working-age population (co-investigator, 2026–2028)
  • NIHR Research for Patient Benefit: RADIANT data-driven trial platform in primary care (co-investigator, £385k, 2022–2026)
  • NIHR: OPTIMAL – AI-assisted management of complex multimorbidity (co-investigator, £2.5M, 2021–2025)
  • UKRI: AI Accelerate – clinical prediction foundation models for multiple long-term conditions (co-investigator, £640k, 2023–2025)
  • Innovate UK ICURe Explore and Exploit: commercialisation of Dexter AI Ltd (principal investigator, 2023–2026)  

Other activities

  • Member, School Research Committee, School of Health Sciences, representing the Health Informatics and Multimorbidity team, with responsibility for research dissemination (2026–present)
  • Director and Chief Technology Officer, Dexter AI Ltd, a University of Birmingham spin-out (2023–present)
  • Co-Director, Dexter Operating Division, University of Birmingham Enterprise (2022–2026)
  • Co-Investigator, Data, Diagnostics and Decision Tools theme, NIHR Birmingham Biomedical Research Centre 

Awards

  • Michael O'Rourke Prize for the best publication from a PhD, University of Birmingham (2022)
  • Team of the Year, Health Data Research UK (2022)
  • Hidden Talent award – support for data, Health Data Research UK (2022)

Former posts

  • Senior Project Manager, University of Birmingham (2023–2026)
  • Research Fellow, University of Birmingham (2019–2023)
  • Research Associate, University of Birmingham (2016–2019)
  • Software Engineer, Capgemini India (2013–2014)

Publications

Recent publications

Article

Hong, N, Acharya, A, Gokhale, K, Cooper, J, Gadd, C, Crowe, F, Nirantharakumar, K & Yau, C 2026, 'Imputation Free Deep Survival Prediction with Conditional Variational Autoencoders', Journal of Healthcare Informatics Research, vol. 10, no. 2, pp. 275-298. https://doi.org/10.1007/s41666-026-00234-y

Phillips, K, Gokhale, K, Damase-Michel, C, Dolk, H, Nelson-Piercy, C, Wakerley, BR, Crowe, F & Nirantharakumar, K 2026, 'Migraine, associated treatments and risk of miscarriage: a matched cohort study and nested case-control study using the CPRD pregnancy register', Cephalalgia, vol. 46, no. 1, 03331024251414634. https://doi.org/10.1177/03331024251414634

Wang, J, Cooper, J, Hathaway, E, Singh, M, Su, L, Gokhale, K, Wambua, S, Crowe, FL, Adderley, NJ, Thomas, GN, Lipkin, G, Hill, LJ, Dasgupta, I, Hanif, W, Kempegowda, P, Subramonian, K, Cheng, KK, Jackson, T, Toulis, KA & Nirantharakumar, K 2026, 'SGLT-2 inhibitors and risk of 59 long-term health conditions, hospitalisation, and mortality', European Journal of Endocrinology . https://doi.org/10.1093/ejendo/lvag156

Gadd, C, Gokhale, K, Acharya, A, Cooper, J, Crowe, F, Fitzsimmons, L, Jackson, T, Nirantharakumar, K, Yau, C & OPTIMAL Consortium 2026, 'SurvivEHR: a competing risks, time-to-event foundation model for multiple long-term conditions from primary care electronic health records', npj Digital Medicine. https://doi.org/10.1038/s41746-026-02709-z

Wang, J, Antza, C, Shen, X, Gooden, T, Tahrani, AA, Lane, DA, Subramanian, A, Gokhale, K, Adderley, NJ, Surenthirakumaran, R, Lotufo, PA, Guo, Y, Hao, W, Thomas, GN, Lip, GYH & On behalf of The NIHR Global AF Reach Group 2026, 'The association between obstructive sleep apnoea and cardiovascular risk in atrial fibrillation: a health system-based cohort study', Heart.

Erridge, S, Chandan, JS, Gokhale, KM, Billinghurst, C, Sodergren, MH & Sakagami, H (ed.) 2025, 'Cannabis Use and Analgesic Prescribing in UK Primary Care: A Retrospective Cohort Study of Patients with Osteoarthritis', Medicines (Basel, Switzerland), vol. 12, no. 4, 27. https://doi.org/10.3390/medicines12040027

Cockburn, N, Hammond, B, Gani, I, Cusworth, S, Acharya, A, Gokhale, K, Thayakaran, R, Crowe, F, Minhas, S, Smith, WP, Taylor, B, Nirantharakumar, K & Chandan, JS 2024, 'Automating incidence and prevalence analysis in open cohorts', BMC Medical Research Methodology, vol. 24, no. 1, 144. https://doi.org/10.1186/s12874-024-02266-7

Snook, L, Minhas, S, Nadda, V, Hammond, B, Gokhale, KM, Taylor, J, Bradbury-Jones, C, Bandyopadhyay, S, Nirantharakumar, K, Adderley, NJ & Chandan, JS 2024, 'The risk of immune-mediated inflammatory diseases following exposure to childhood maltreatment: a retrospective cohort study using UK primary care data', Heliyon, vol. 10, no. 22, e40493. https://doi.org/10.1016/j.heliyon.2024.e40493

Gokhale, KM, Chandan, JS, Sainsbury, C, Tino, P, Tahrani, A, Toulis, K & Nirantharakumar, K 2024, 'Using Repeated Measurements to Predict Cardiovascular Risk in Patients With Type 2 Diabetes Mellitus', The American Journal of Cardiology, vol. 210, pp. 133-142. https://doi.org/10.1016/j.amjcard.2023.10.008

Azfr Ali, R, Jalal, Z, Chandan, J, Subramanian, A, Adderley, N, Nirantharakumar, K, Gokhale, K & Paudyal, V 2023, 'Cardiometabolic screening and monitoring in patients prescribed antipsychotic drugs in primary care: A population-based cohort study', Comprehensive Psychiatry, vol. 127, 152419. https://doi.org/10.1016/j.comppsych.2023.152419

Nash, K, Minhas, S, Metheny, N, Gokhale, KM, Taylor, J, Bradbury-Jones, C, Bandyopadhyay, S, Nirantharakumar, K, Adderley, NJ & Chandan, JS 2023, 'Exposure to domestic abuse and the subsequent development of atopic disease in women', Journal of Allergy and Clinical Immunology: In Practice, vol. 11, no. 6, pp. 1752-1756.e3. https://doi.org/10.1016/j.jaip.2023.03.016

Syed, U, Subramanian, A, Wraith, D, Lord, J, McGee, K, Gokhale, K, Nirantharakumar, K & Haroon, S 2023, 'Incidence of immune-mediated inflammatory diseases following COVID-19: a matched cohort study in UK primary care', BMC Medicine, vol. 21, no. 1, 363. https://doi.org/10.1186/s12916-023-03049-5

Rashan, A, Beane, A, Ghose, A, Dondorp, AM, Kwizera, A, Vijayaraghavan, BKT, Biccard, B, Righy, C, Thwaites, CL, Pell, C, Sendagire, C, Thomson, D, Done, DG, Aryal, D, Wagstaff, D, Nadia, F, Putoto, G, Panaru, H, Udayanga, I, Amuasi, J, Salluh, J, Gokhale, K, Nirantharakumar, K, Pisani, L, Hashmi, M, Schultz, M, Ghalib, MS, Mukaka, M, Mat-Nor, MB, Siaw-frimpong, M, Surenthirakumaran, R, Haniffa, R, Kaddu, RP, Pereira, SP, Murthy, S, Harris, S, Moonesinghe, SR, Vengadasalam, S, Tripathy, S, Tolppa, T, Pari, V, Waweru-Siika, W, Minh, YL & The Collaboration for Research, Implementation and Training in Critical Care in Asia and Africa (CCAA) 2023, 'Mixed methods study protocol for combining stakeholder-led rapid evaluation with near real-time continuous registry data to facilitate evaluations of quality of care in intensive care units', Wellcome Open Research, vol. 8, 29. https://doi.org/10.12688/wellcomeopenres.18710.3

Cooper, J, Nirantharakumar, K, Crowe, F, Azcoaga-Lorenzo, A, McCowan, C, Jackson, T, Acharya, A, Gokhale, K, Gunathilaka, N, Marshall, T & Haroon, S 2023, 'Prevalence and demographic variation of cardiovascular, renal, metabolic, and mental health conditions in 12 million english primary care records', BMC Medical Informatics and Decision Making, vol. 23, no. 1, 220. https://doi.org/10.1186/s12911-023-02296-z

Abstract

Billinghurst, C, Wang, J, Gokhale, K, Nirantharakumar, K, Armstrong, R, Rice, W, Fleming, SD & Evbuomwan, I 2025, 'CO234 The Association of Glucagon-Like Peptide-1 Receptor Agonists With Hepatopancreatobiliary Diseases in Individuals With Type 2 Diabetes Mellitus', Value in Health, vol. 28, no. 12, Supplement 1, pp. S90-S90. https://doi.org/10.1016/j.jval.2025.09.335

View all publications in research portal