Professor Jo Parish BSc, PhD

Professor Jo Parish

Department of Cancer and Genomic Sciences
Professor of Tumour Virology
Director of Research and Knowledge Transfer, College of Medicine and Health

Contact details

Address
Department of Cancer and Genomic Sciences
University of Birmingham
Edgbaston
Birmingham
B15 2TT
UK

Professor Jo Parish is the Director of Research and Knowledge Transfer for the College of Medicine and Health at the University of Birmingham.

The main focus of Jo’s research is the study of novel virus-host interactions that are important for human papillomavirus (HPV) pathogenesis and persistence. Jo has a longstanding interest in the molecular biology of the HPV life cycle and uses state-of-the art model systems and technologies to study HPV replication and persistence as well as virus and host transcription control.

Qualifications

  • PhD in Biochemistry, University of Bristol, 2002
  • BSc in Biochemistry, University of Bristol, 1998

Biography

Professor Jo Parish completed her PhD at the University of Bristol in 2002, during which she elucidated the mechanism of the induction of apoptosis by the HPV E2 protein under the supervision of Prof. Kevin Gaston. Following her PhD studies, she moved to the University of Massachusetts Medical School, USA to work with Prof. Elliot Androphy. During this time, Jo continued her study of the papillomavirus E2 protein and discovered several novel virus-host interactions including an interaction with the cellular DNA helicase ChlR1. Her work elegantly demonstrated that ChlR1 is required for the maintenance and persistence of papillomavirus by tethering viral genomes to cellular chromatin during mitosis and was published in Molecular Cell.

In 2007, Jo was awarded a highly competitive Royal Society University Research Fellowship and returned to the UK to establish her independent research group at the University of St Andrews. Jo was recruited to the University of Birmingham, UK in 2012 and is Group Leader of the HPV Persistence Group and promoted to Professor of Tumour Virology in 2021. Jo’s research is currently focused on the molecular biology of transcriptional control and persistence of HPV and other small DNA viruses. Her recent research has identified an essential role for the host transcription factors CTCF and YY1 in the control of differentiation-dependent virus gene expression and her research has unravelling the mechanism of HPV transcription control through epigenetic regulation. Using primary-cell based tissue models and state-of-the-art sequencing technologies, Jo is understanding novel mechanisms of HPV-driven host transcription control and reprogramming and how these events contribute to cancer development.

Jo is a passionate mentor of early career researchers and continues to promote virology on a national and international stage.

Teaching

  • Professor and Tutor for BMedSci
  • MBChB Tutor: ‘Cancer: Causes to Cures’

Postgraduate supervision

Professor Jo Parish has supervised more than 20 postgraduate students in areas of virology and cancer biology. Many of these students now hold posts at prestigious national and international research institutes.

Jo is interested in supervising doctoral research students in the following areas:

  • Regulation of HPV gene expression control and host cell transcription
  • Regulation of HPV replication and persistence

If you are interested in studying any of these subject areas please contact Jo directly, or for any general doctoral research enquiries, please email mds-gradschool@contacts.bham.ac.uk

Research

Research Theme

Professor Parish’s research programme aims to understand the mechanistic underpinnings of virus gene expression control, replication and persistence using physiological models of human papillomavirus (HPV) infections.

Current projects:

Virus-host interactions important for the control of HPV gene expression and HPV-induced carcinogenesis

Using primary keratinocyte-based models of HPV infections, we are characterizing novel host factors that are important for virus oncogene expression and differentiation-dependent regulation of HPV gene expression. Our collaborative work with Dr Sally Roberts has highlighted an important interaction between HPV and the host cell transcriptional regulator CTCF in the control of virus oncogene expression and we are currently analysing this interplay in HPV-induced disease progression. Work is supported by the Medical Research Council.

Viral manipulation of host cell gene expression

Using state-of-the-art technologies such as RNA-Seq, ChIP-Seq and ATAC-Seq we are discovering how HPV manipulates transcriptional control of host cell genes to support virus life cycle. These studies are increasing our understanding of how HPV infection contributes to cancer development and will inform the design of novel diagnostic and prognostic biomarkers. Work is supported by the NIHR Biomedical Research Centre, Birmingham and the Medical Research Council.

Member of the Birmingham Centre for Genome Biology   

Other activities

  • Senior Editor of mSphere, American Society for Microbiology (2025 - present)
  • Associate Editor, Royal Society Open Science (2021-present)
  • Editor of Journal of General Virology (2018-2025)
  • Editorial Board Member of Viruses (2014-present)
  • Chair Elect of Microbiology Society Virus Division (2019-2023)
  • Elected member of the Microbiology Society Virus Division Committee (2015-2018)
  • Lecturer in Medical Science, University of St Andrews (2007-2012)
  • Member of the American Society for Microbiology
  • Member of the Heinrich-Pette Institute for Medical Virology, Hamburg Scientific Advisory Board

 

Publications

Recent publications

Article

Oladipo, KH & Parish, J 2025, 'De-regulation of Aurora kinases by oncogenic HPV: implications in cancer development and treatment', Tumour Virus Research, vol. 19, 200314. https://doi.org/10.1016/j.tvr.2025.200314

Hillier, B, Waterboer, T, Brooks, J, Nankivell, P, Agarwal, R, Abou-Foul, A, Fulton-Lieuw, T, Kristunas, C, Vorsters, A, Cacciatore, P, Parish, J & Mehanna, H 2025, 'Efficacy of oral rinse and other detection methods in detecting oral human papillomavirus infections: the Oromouth cohort study', Journal of Infection. https://doi.org/10.1016/j.jinf.2025.106438

Campos-León, K, Ferguson, J, Günther, T, Wood, CD, Wingett, SW, Pekel, S, Varghese, CS, Jones, LS, Stockton, JD, Várnai, C, West, MJ, Beggs, A, Grundhoff, A, Noyvert, B, Roberts, S & Parish, JL 2025, 'Repression of CADM1 transcription by HPV type 18 is mediated by three-dimensional rearrangement of promoter-enhancer interactions', PLoS Pathogens, vol. 21, no. 1, e1012506. https://doi.org/10.1371/journal.ppat.1012506

Dobrica, MO, Varghese, CS, Harris, JM, Ferguson, J, Magri, A, Arnold, R, Várnai, C, Parish, JL & McKeating, JA 2024, 'CTCF regulates hepatitis B virus cccDNA chromatin topology', Journal of General Virology, vol. 105, no. 1, 001939. https://doi.org/10.1099/jgv.0.001939

Califano, J, Yousef, A, Mostafa, H, Valsamakis, A, Zhang, X, Batis, N, Varghese, C, Parish, J, Forman, M, Jarrett, J, Messer, K & Mehanna, H 2023, 'Lead Time to Recurrence After Posttreatment Plasma and Saliva HPV DNA Testing in Patients With Low-Risk HPV Oropharynx Cancer', JAMA Otolaryngology - Head and Neck Surgery, vol. 149, no. 9, pp. 812-819. https://doi.org/10.1001/jamaoto.2023.1730

Magon, KL & Parish, JL 2021, 'From infection to cancer: how DNA tumour viruses alter host cell central carbon and lipid metabolism', Open Biology, vol. 11, no. 3, 210004. https://doi.org/10.1098/rsob.210004

Gleneadie, HJ, Baker, AH, Batis, N, Bryant, J, Jiang, Y, Clokie, SJH, Mehanna, H, Garcia, P, Gendoo, DMA, Roberts, S, Burley, M, Molinolo, AA, Gutkind, JS, Scheven, BA, Cooper, PR, Parish, JL, Khanim, FL & Wiench, M 2021, 'The anti-tumour activity of DNA methylation inhibitor 5-aza-2′-deoxycytidine is enhanced by the common analgesic paracetamol through induction of oxidative stress', Cancer Letters, vol. 501, pp. 172-186. https://doi.org/10.1016/j.canlet.2020.12.029

Ferguson, J, Leon, KC, Pentland, I, Stockton, J, Günther, T, Grundhoff, A, Beggs, A, Roberts, S, Noyvert, B & Parish, JL 2021, 'The chromatin insulator CTCF regulates HPV18 transcript splicing and differentiation-dependent late gene expression', PLoS Pathogens, vol. 17, no. 11, e1010032. https://doi.org/10.1371/journal.ppat.1010032

Kong, A, Good, JS, Kirkham, A, Savage, J, Mant, R, Llewellyn, L, Parish, J, Spruce, R, Forster, M, Schipani, S, Harrington, K, Sacco, JJ, Murray, P, Middleton, G, Yap, C & Mehanna, H 2020, 'Phase I trial of WEE1 inhibition with chemotherapy and radiotherapy as adjuvant treatment, and a window of opportunity trial with cisplatin in patients with head and neck cancer: the WISTERIA trial protocol', BMJ open, vol. 10, no. 3, e033009. https://doi.org/10.1136/bmjopen-2019-033009

D'Arienzo, V, Ferguson, J, Giraud, G, Chapus, F, Harris, J, Wing, P, Claydon, A, Begum, S, Zhuang, X, Balfe, P, Testoni, B, McKeating, JA & Parish, J 2020, 'The CCCTC-binding factor CTCF represses hepatitis B virus Enhancer I and regulates viral transcription', Cellular Microbiology, vol. 2020, e13274. https://doi.org/10.1111/cmi.13274

Preprint

Dobrica, MO, Varghese, CS, Harris, JM, Ferguson, J, Magri, A, Arnold, R, Várnai, C, Parish, JL & McKeating, JA 2023 'CTCF regulates hepatitis B virus cccDNA chromatin topology' bioRxiv. https://doi.org/10.1101/2023.09.06.556185

Groves, IJ, Tang, G, Pentland, I, Parish, JL & Coleman, N 2021 'CTCF association with episomal HPV16 genomes regulates viral oncogene transcription and splicing' bioRxiv. https://doi.org/10.1101/2021.02.18.431881

Ferguson, J, Leon, KC, Pentland, I, Stockton, J, Günther, T, Beggs, A, Roberts, S, Noyvert, B & Parish, JL 2021 'The chromatin insulator CTCF regulates HPV18 transcript splicing and differentiation-dependent late gene expression' bioRxiv. https://doi.org/10.1101/2021.04.30.442078

Review article

Varghese, CS, Parish, JL & Ferguson, J 2022, 'Lying low-chromatin insulation in persistent DNA virus infection', Current Opinion in Virology, vol. 55, 101257. https://doi.org/10.1016/j.coviro.2022.101257

Burley, M, Roberts, S & Parish, JL 2020, 'Epigenetic regulation of human papillomavirus transcription in the productive virus life cycle', Seminars in immunopathology, vol. 42, no. 2, pp. 159-171. https://doi.org/10.1007/s00281-019-00773-0

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