Recent publications
Article
Pugh, HL, Connor, C, Siasat, P, McNally, A & Blair, JMA 2023, 'E. coli ST11 (O157:H7) does not encode a functional AcrF efflux pump', Microbiology, vol. 169, no. 4, 001324. https://doi.org/10.1099/mic.0.001324
Carrilero, L, Dunn, SJ, Moran, RA, McNally, A & Brockhurst, MA 2023, 'Evolutionary responses to acquiring a multidrug resistance plasmid are dominated by metabolic functions across diverse Escherichia coli lineages', mSystems. https://doi.org/10.1128/msystems.00713-22
Moran, RA, Baomo, L, Doughty, EL, Guo, Y, Ba, X, van Schaik, W, Zhuo, C & McNally, A 2023, 'Extended-Spectrum β-Lactamase Genes Traverse the Escherichia coli Populations of Intensive Care Unit Patients, Staff, and Environment', Microbiology spectrum. https://doi.org/10.1128/spectrum.05074-22
Darby, EM, Bavro, VN, Dunn, S, Mcnally, A & Blair, JMA 2023, 'RND pumps across the genus Acinetobacter: AdeIJK is the universal efflux pump', Microbial Genomics, vol. 9, no. 3, 000964. https://doi.org/10.1099/mgen.0.000964
Zhang, P, Hu, H, Shi, Q, Sun, L, Wu, X, Hua, X, McNally, A, Jiang, Y, Yu, Y & Du, X 2023, 'The Effect of β-Lactam Antibiotics on the Evolution of Ceftazidime/Avibactam and Cefiderocol Resistance in KPC-Producing Klebsiella pneumoniae', Antimicrobial Agents and Chemotherapy. https://doi.org/10.1128/aac.01279-22
Snaith, AE, Dunn, SJ, Moran, RA, Newton, PN, Dance, DAB, Davong, V, Kuenzli, E, Kantele, A, Corander, J & McNally, A 2023, 'The highly diverse plasmid population found in Escherichia coli colonizing travellers to Laos and its role in antimicrobial resistance gene carriage', Microbial Genomics, vol. 9, no. 5, 001000. https://doi.org/10.1099/mgen.0.001000
Liu, Y, Zhu, S, Wei, L, Feng, Y, Cai, L, Dunn, S, McNally, A & Zong, Z 2022, 'Arm race among closely-related carbapenem-resistant Klebsiella pneumoniae clones', ISME Communications, vol. 2, no. 1, 76. https://doi.org/10.1038/s43705-022-00163-y
The COVID-19 Genomics U. K. (COG-UK) Consortium, Modat, M, Hammers, A, Spector, TD, Steves, CJ, Sudre, CH, Ourselin, S & Duncan, EL 2022, 'COVID-19 due to the B.1.617.2 (Delta) variant compared to B.1.1.7 (Alpha) variant of SARS-CoV-2: a prospective observational cohort study', Scientific Reports, vol. 12, no. 1, 10904. https://doi.org/10.1038/s41598-022-14016-0
Fang, Q, Feng, Y, McNally, A & Zong, Z 2022, 'Characterization of phage resistance and phages capable of intestinal decolonization of carbapenem-resistant Klebsiella pneumoniae in mice', Communications Biology, vol. 5, no. 1, 48. https://doi.org/10.1038/s42003-022-03001-y
Hu, Y, Zhang, H, Wei, L, Feng, Y, Wen, H, Li, J, Zhang, Z, Yang, Y, Moran, RA, McNally, A & Zong, Z 2022, 'Competitive transmission of carbapenem-resistant Klebsiella pneumoniae in a newly opened intensive care unit', mSystems, vol. 7, no. 6, e0079922. https://doi.org/10.1128/msystems.00799-22
Cummins, EA, Hall, RJ, Connor, C, Mcinerney, JO & Mcnally, A 2022, 'Distinct evolutionary trajectories in the Escherichia coli pangenome occur within sequence types', Microbial Genomics, vol. 8, no. 11, 000903. https://doi.org/10.1099/mgen.0.000903
Davies, M, Galazzo, G, van Hattem, JM, Arcilla, MS, Melles, DC, de Jong, MD, Schultsz, C, Wolffs, P, McNally, A, Schaik, WV & Penders, J 2022, 'Enterobacteriaceae and Bacteroidaceae provide resistance to travel-associated intestinal colonization by multi-drug resistant Escherichia coli', Gut Microbes, vol. 14, no. 1, e2060676. https://doi.org/10.1080/19490976.2022.2060676
Hu, Y, Moran, RA, Blackwell, GA, McNally, A & Zong, Z 2022, 'Fine-scale reconstruction of the evolution of FII-33 multidrug resistance plasmids enables high-resolution genomic surveillance', mSystems, vol. 7, no. 1, e0083121. https://doi.org/10.1128/msystems.00831-21
Comment/debate
McNally, A 2022, 'Covid-19 testing in the UK was not a "shambles" in 2020', BMJ, vol. 377, o916, pp. o916. https://doi.org/10.1136/bmj.o916
Review article
Yang, Y, Yan, Y-H, Schofield, CJ, McNally, A, Zong, Z & Li, G-B 2023, 'Metallo-β-lactamase-mediated antimicrobial resistance and progress in inhibitor discovery', Trends in Microbiology. https://doi.org/10.1016/j.tim.2023.01.013
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