Recent publications
Article
De Los Santos-Hernández, M, Montero-Hernández, S, Orihuela-Espina, F & Sucar, LE 2026, 'CausalMorph: Preconditioning data for linear non-Gaussian acyclic models', Knowledge-Based Systems, vol. 341, 115773. https://doi.org/10.1016/j.knosys.2026.115773
Ward, RJ, Rodriguez-Gomez, G & Orihuela-Espina, F 2026, 'Full Model Optimisation of the Processing Pipeline in Functional Near-Infrared Spectroscopy', Neuroinformatics, vol. 24, no. 2, 20. https://doi.org/10.1007/s12021-026-09772-7
Orihuela-Espina, F & Ward, R 2026, 'Overprocessing in neuroimaging processing pipelines, illustrated with functional near-infrared spectroscopy (fNIRS)', Journal of Ambient Intelligence and Humanized Computing, vol. 17, no. 3, pp. 807-827. https://doi.org/10.1007/s12652-026-05074-7
Ward, RJ & Orihuela-Espina, F 2025, 'Crust & Crumb Sampling: Efficient sampling design for high dimensional parameter recovery', Measurement Science and Technology, vol. 36, no. 6, 065410. https://doi.org/10.1088/1361-6501/adde7a
BIDS Maintainers, Luke, R, Oostenveld, R, Cockx, H, Niso, G, Shader, MJ, Orihuela-Espina, F, Innes-Brown, H, Tucker, S, Boas, D, Yücel, MA, Gau, R, Salo, T, Appelhoff, S, Markiewicz, CJ, McAlpine, D & Pollonini, L 2025, 'NIRS-BIDS: Brain Imaging Data Structure Extended to Near-Infrared Spectroscopy', Scientific Data, vol. 12, no. 1, 159. https://doi.org/10.1038/s41597-024-04136-9
Stute, K, Gossé, L, Montero Hernandez, S, Perkins, G, Yücel, MA, Orihuela-Espina, F, Mesquita, R, Dehghani, H & Elsherif, M 2025, 'The fNIRS glossary project: a consensus-based resource for functional near-infrared spectroscopy terminology', Neurophotonics, vol. 12, no. 2, 027801. https://doi.org/10.1117/1.NPh.12.2.027801
Dale, R, Zheng, B, Orihuela-Espina, F, Ross, N, O'Sullivan, TD, Howard, S & Dehghani, H 2024, 'Deep learning-enabled high-speed, multi-parameter diffuse optical tomography', Journal of Biomedical Optics, vol. 29, no. 7, 076004. https://doi.org/10.1117/1.JBO.29.7.076004
del Rocío Hernández-Castañón, V, Castillo-Ávila, AA, Reyes-Meza, V, Bianchi-Berthouze, N, Morán, AL & Orihuela-Espina, F 2023, 'Effect of the level of task abstraction on the transfer of knowledge from virtual environments in cognitive and motor tasks', Frontiers in Behavioral Neuroscience, vol. 17, 1162744. https://doi.org/10.3389/fnbeh.2023.1162744
Zaqueros-Martinez, J, Rodriguez-Gomez, G, Tlelo-Cuautle, E & Orihuela-Espina, F 2023, 'Fuzzy Synchronization of Chaotic Systems with Hidden Attractors', Entropy, vol. 25, no. 3, 495. https://doi.org/10.3390/e25030495
Conference contribution
Ward, R & Orihuela-Espina, F 2025, Finding the perfect NIRS pipeline. in Proceedings, European Conferences on Biomedical Optics: 22–26 June 2025, Munich, Germany., W1B.1, European Conferences on Biomedical Optics, Optica Publishing Group (formerly OSA), European Conferences on Biomedical Optics 2025, Munich, Germany, 22/06/25. https://doi.org/10.1364/ECBO.2025.W1B.1
Ward, R & Orihuela-Espina, F 2025, Finding the perfect NIRS pipeline. in European Conferences on Biomedical Optics, 22–26 June 2025, Munich, Germany., 1393515, Proceedings of SPIE, vol. 13935, Society of Photo-Optical Instrumentation Engineers, European Conferences on Biomedical Optics 2025, Munich, Germany, 22/06/25. https://doi.org/10.1117/12.3098414
Re, R, Contini, L, Contini, D, Orihuela-Espina, F, Torricelli, A & Spinelli, L 2023, Cerebral resting state oscillations study with TD fNIRS. in D Contini, Y Hoshi & TD O'Sullivan (eds), Diffuse Optical Spectroscopy and Imaging IX., 126280I, Proceedings of SPIE - The International Society for Optical Engineering, vol. 12628, Society of Photo-Optical Instrumentation Engineers, Diffuse Optical Spectroscopy and Imaging IX 2023, Munich, Germany, 25/06/23. https://doi.org/10.1117/12.2668895
Letter
Guevara, E, Mesquita, RC & Orihuela-Espina, F 2026, 'Emerging panorama of functional near-infrared spectroscopy in Latin America', Neurophotonics, vol. 13, no. S1, S13002. https://doi.org/10.1117/1.NPh.13.S1.S13002
Review article
Ward, RJ, Diop, M, Tachtsidis, I & Orihuela-Espina, F 2026, 'Recent Near-Infrared Approaches to Cytochrome-c-Oxidase Monitoring: A Systematic Review of Instruments and Algorithms', Physics in Medicine and Biology. https://doi.org/10.1088/1361-6560/ae62f3
Almukhtar, A, Caddick, V, Naik, R, Goble, M, Mylonas, G, Darzi, A, Orihuela-Espina, F & Leff, DR 2025, 'Objective Assessment of Cognitive Workload in Surgery: A Systematic Review', Annals of surgery, vol. 281, no. 6, pp. 942-951. https://doi.org/10.1097/SLA.0000000000006370
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