Recent publications
Article
De Los Santos-Hernández, M, Montero-Hernández, S, Orihuela-Espina, F & Sucar, LE 2026, 'CausalMorph: Preconditioning data for linear non-Gaussian acyclic models', Knowledge-Based Systems, vol. 341, 115773. https://doi.org/10.1016/j.knosys.2026.115773
Ward, RJ, Rodriguez-Gomez, G & Orihuela-Espina, F 2026, 'Full Model Optimisation of the Processing Pipeline in Functional Near-Infrared Spectroscopy', Neuroinformatics, vol. 24, no. 2, 20. https://doi.org/10.1007/s12021-026-09772-7
Orihuela-Espina, F & Ward, R 2026, 'Overprocessing in neuroimaging processing pipelines, illustrated with functional near-infrared spectroscopy (fNIRS)', Journal of Ambient Intelligence and Humanized Computing. https://doi.org/10.1007/s12652-026-05074-7
Ward, RJ & Orihuela-Espina, F 2025, 'Crust & Crumb Sampling: Efficient sampling design for high dimensional parameter recovery', Measurement Science and Technology, vol. 36, no. 6, 065410. https://doi.org/10.1088/1361-6501/adde7a
BIDS Maintainers, Luke, R, Oostenveld, R, Cockx, H, Niso, G, Shader, MJ, Orihuela-Espina, F, Innes-Brown, H, Tucker, S, Boas, D, Yücel, MA, Gau, R, Salo, T, Appelhoff, S, Markiewicz, CJ, McAlpine, D & Pollonini, L 2025, 'NIRS-BIDS: Brain Imaging Data Structure Extended to Near-Infrared Spectroscopy', Scientific Data, vol. 12, no. 1, 159. https://doi.org/10.1038/s41597-024-04136-9
Stute, K, Gossé, L, Montero Hernandez, S, Perkins, G, Yücel, MA, Orihuela-Espina, F, Mesquita, R, Dehghani, H & Elsherif, M 2025, 'The fNIRS glossary project: a consensus-based resource for functional near-infrared spectroscopy terminology', Neurophotonics, vol. 12, no. 2, 027801. https://doi.org/10.1117/1.NPh.12.2.027801
Dale, R, Zheng, B, Orihuela-Espina, F, Ross, N, O'Sullivan, TD, Howard, S & Dehghani, H 2024, 'Deep learning-enabled high-speed, multi-parameter diffuse optical tomography', Journal of Biomedical Optics, vol. 29, no. 7, 076004. https://doi.org/10.1117/1.JBO.29.7.076004
del Rocío Hernández-Castañón, V, Castillo-Ávila, AA, Reyes-Meza, V, Bianchi-Berthouze, N, Morán, AL & Orihuela-Espina, F 2023, 'Effect of the level of task abstraction on the transfer of knowledge from virtual environments in cognitive and motor tasks', Frontiers in Behavioral Neuroscience, vol. 17, 1162744. https://doi.org/10.3389/fnbeh.2023.1162744
Zaqueros-Martinez, J, Rodriguez-Gomez, G, Tlelo-Cuautle, E & Orihuela-Espina, F 2023, 'Fuzzy Synchronization of Chaotic Systems with Hidden Attractors', Entropy, vol. 25, no. 3, 495. https://doi.org/10.3390/e25030495
Conference contribution
Ward, R & Orihuela-Espina, F 2025, Finding the perfect NIRS pipeline. in Proceedings, European Conferences on Biomedical Optics: 22–26 June 2025, Munich, Germany., W1B.1, European Conferences on Biomedical Optics, Optica Publishing Group (formerly OSA), European Conferences on Biomedical Optics 2025, Munich, Germany, 22/06/25. https://doi.org/10.1364/ECBO.2025.W1B.1
Ward, R & Orihuela-Espina, F 2025, Finding the perfect NIRS pipeline. in European Conferences on Biomedical Optics, 22–26 June 2025, Munich, Germany., 1393515, Proceedings of SPIE, vol. 13935, SPIE, European Conferences on Biomedical Optics 2025, Munich, Germany, 22/06/25. https://doi.org/10.1117/12.3098414
Re, R, Contini, L, Contini, D, Orihuela-Espina, F, Torricelli, A & Spinelli, L 2023, Cerebral resting state oscillations study with TD fNIRS. in D Contini, Y Hoshi & TD O'Sullivan (eds), Diffuse Optical Spectroscopy and Imaging IX., 126280I, Proceedings of SPIE - The International Society for Optical Engineering, vol. 12628, SPIE, Diffuse Optical Spectroscopy and Imaging IX 2023, Munich, Germany, 25/06/23. https://doi.org/10.1117/12.2668895
Letter
Guevara, E, Mesquita, RC & Orihuela-Espina, F 2026, 'Emerging panorama of functional near-infrared spectroscopy in Latin America', Neurophotonics, vol. 13, no. S1, S13002. https://doi.org/10.1117/1.NPh.13.S1.S13002
Review article
Ward, RJ, Diop, M, Tachtsidis, I & Orihuela-Espina, F 2026, 'Recent Near-Infrared Approaches to Cytochrome-c-Oxidase Monitoring: A Systematic Review of Instruments and Algorithms', Physics in Medicine and Biology. https://doi.org/10.1088/1361-6560/ae62f3
Almukhtar, A, Caddick, V, Naik, R, Goble, M, Mylonas, G, Darzi, A, Orihuela-Espina, F & Leff, DR 2025, 'Objective Assessment of Cognitive Workload in Surgery: A Systematic Review', Annals of surgery, vol. 281, no. 6, pp. 942-951. https://doi.org/10.1097/SLA.0000000000006370
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