Recent publications
Article
Acuna-Gonzalez, A, Kujawska, M, Youssif, M, Atkinson, T, Grundy, S, Hutchison, A, Tremlett, C, Clarke, P & Hall, LJ 2023, 'Bifidobacterium bacteraemia is rare with routine probiotics use in preterm infants: A further case report with literature review', Anaerobe, vol. 80, 102713. https://doi.org/10.1016/j.anaerobe.2023.102713
Zhou, DT, Mudhluli, T, Hall, L, Manasa, J & Munyati, S 2023, 'A Scoping Review of Gut Microbiome and Bifidobacterium Research in Zimbabwe: Implications for Future Studies', Pediatric health, medicine and therapeutics, vol. 14, pp. 483—496. https://doi.org/10.2147/PHMT.S414766
Elek, CKA, Brown, TL, Viet, TL, Evans, R, Baker, DJ, Telatin, A, Tiwari, SK, Al-Khanaq, H, Thilliez, G, Kingsley, RA, Hall, LJ, Webber, MA & Adriaenssens, EM 2023, 'A hybrid and poly-polish workflow for the complete and accurate assembly of phage genomes: a case study of ten przondoviruses', Microbial Genomics, vol. 9, no. 7, 001065. https://doi.org/10.1099/mgen.0.001065
Teng, NMY, Kiu, R, Evans, R, Baker, DJ, Zenner, C, Robinson, SD & Hall, LJ 2023, 'Allocoprobacillus halotolerans gen. nov., sp. nov and Coprobacter tertius sp. nov., isolated from human gut microbiota', International Journal of Systematic and Evolutionary Microbiology, vol. 73, no. 7, 005950. https://doi.org/10.1099/ijsem.0.005950
Serghiou, IR, Baker, D, Evans, R, Dalby, MJ, Kiu, R, Trampari, E, Phillips, S, Watt, R, Atkinson, T, Murphy, B, Hall, LJ & Webber, MA 2023, 'An efficient method for high molecular weight bacterial DNA extraction suitable for shotgun metagenomics from skin swabs', Microbial Genomics, vol. 9, no. 7, 001058. https://doi.org/10.1099/mgen.0.001058
Serghiou, IR, Webber, MA & Hall, LJ 2023, 'An update on the current understanding of the infant skin microbiome and research challenges', Current Opinion in Microbiology, vol. 75, 102364. https://doi.org/10.1016/j.mib.2023.102364
Neumann, CJ, Mahnert, A, Kumpitsch, C, Kiu, R, Dalby, MJ, Kujawska, M, Madl, T, Kurath-Koller, S, Urlesberger, B, Resch, B, Hall, LJ & Moissl-Eichinger, C 2023, 'Clinical NEC prevention practices drive different microbiome profiles and functional responses in the preterm intestine', Nature Communications, vol. 14, no. 1, 1349. https://doi.org/10.1038/s41467-023-36825-1
James, SA, Telatin, A, Baker, D, Evans, R, Clarke, P, Hall, LJ & Carding, SR 2023, 'Draft Genome Sequence of a Preterm Infant-Derived Isolate of Candida parapsilosis', Microbiology resource announcements, vol. 12, no. 3. https://doi.org/10.1128/mra.01273-22
Saeed, MH & Hall, LJ 2023, 'Early-life antibiotic usage and impact on the gut microbiota, including emergence of antimicrobial resistant Enterococcus', Microbiota and Host, vol. 1, no. 1, e230002. https://doi.org/10.1530/MAH-23-0002
Kadia, BM, Otiti, MI, Ramsteijn, A, Sow, D, Faye, B, Heffernan, C, Hall, LJ, Webster, JP, Walker, AW & Allen, S 2023, 'Modulating the early-life gut microbiota using pro-, pre-, and synbiotics to improve gut health, child development, and growth', Nutrition Reviews. https://doi.org/10.1093/nutrit/nuad050
Zenner, C, Chalklen, L, Adjei, H, Dalby, MJ, Mitra, S, Cornwell, E, Shaw, AG, Sim, K, Kroll, JS & Hall, LJ 2023, 'Noninvasive Fecal Cytokine and Microbiota Profiles Predict Commencement of Necrotizing Enterocolitis in a Proof-of-Concept Study', Gastro Hep Advances, vol. 2, no. 5, pp. 666-675. https://doi.org/10.1016/j.gastha.2023.03.003
Kiu, R, Shaw, AG, Sim, K, Acuna-Gonzalez, A, Price, CA, Bedwell, H, Dreger, SA, Fowler, WJ, Cornwell, E, Pickard, D, Belteki, G, Malsom, J, Phillips, S, Young, GR, Schofield, Z, Alcon-Giner, C, Berrington, JE, Stewart, CJ, Dougan, G, Clarke, P, Douce, G, Robinson, SD, Kroll, JS & Hall, LJ 2023, 'Particular genomic and virulence traits associated with preterm infant-derived toxigenic Clostridium perfringens strains', Nature Microbiology, vol. 8, no. 6, pp. 1160-1175. https://doi.org/10.1038/s41564-023-01385-z
Letter
Kujawska, M, Schaubeck, M, Hall, L & Neuhaus, K 2023, 'Draft genome sequence of Bifidobacterium breve DSM 32583, isolated from human milk', Microbiology resource announcements, vol. 12, no. 11, e0041223. https://doi.org/10.1128/MRA.00412-23
Review article
Roager, HM, Stanton, C & Hall, LJ 2023, 'Microbial metabolites as modulators of the infant gut microbiome and host-microbial interactions in early life', Gut Microbes, vol. 15, no. 1, 2192151. https://doi.org/10.1080/19490976.2023.2192151
Kennedy, KM, de Goffau, MC, Perez-Muñoz, ME, Arrieta, MC, Bäckhed, F, Bork, P, Braun, T, Bushman, FD, Dore, J, de Vos, WM, Earl, AM, Eisen, JA, Elovitz, MA, Ganal-Vonarburg, SC, Gänzle, MG, Garrett, WS, Hall, LJ, Hornef, MW, Huttenhower, C, Konnikova, L, Lebeer, S, Macpherson, AJ, Massey, RC, McHardy, AC, Koren, O, Lawley, TD, Ley, RE, O’Mahony, L, O’Toole, PW, Pamer, EG, Parkhill, J, Raes, J, Rattei, T, Salonen, A, Segal, E, Segata, N, Shanahan, F, Sloboda, DM, Smith, GCS, Sokol, H, Spector, TD, Surette, MG, Tannock, GW, Walker, AW, Yassour, M & Walter, J 2023, 'Questioning the fetal microbiome illustrates pitfalls of low-biomass microbial studies', Nature, vol. 613, no. 7945, pp. 639-649. https://doi.org/10.1038/s41586-022-05546-8
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